> For the complete documentation index, see [llms.txt](https://rotsl.gitbook.io/rotsl/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://rotsl.gitbook.io/rotsl/readme.md).

# Home

![rotsl logo](/files/aDgYLgMD4KubQnuY002Q)

Research Automation · Computer Vision · Embedded Systems · Applied Machine Learning Portfolio

![Animated portfolio map](/files/b643CNGKM2HKsFEEBXce)

I use `rotsl` as a public portfolio for research automation, biological imaging, computer vision, context tooling, developer infrastructure, embedded systems, and applied machine-learning systems.

My work collected here moves between physical experiments and software systems: robotic imaging for Petri dishes, segmentation and morphometric analysis, context compilers for language-model workflows, GitHub Apps, developer tooling, and research prototypes.

## Portfolio focus

This portfolio is organized for readers searching for:

* robotic imaging and research automation;
* Petri-dish image analysis, biological computer vision, and morphometrics;
* PyPI and npm packages for developer workflows and context systems;
* applied machine-learning models, AI-agent tooling, and runtime experiments;
* publications and community work around automation in biology.

## Start here

[![Projects](https://img.shields.io/badge/Explore-Projects-111827?style=for-the-badge)](/rotsl/projects.md)

[![Bio Imaging](https://img.shields.io/badge/View-Bio%20Imaging-0f766e?style=for-the-badge)](/rotsl/projects/bio-imaging.md)

[![Models](https://img.shields.io/badge/View-Models-f2994a?style=for-the-badge)](/rotsl/projects/models.md)

[![Publications](https://img.shields.io/badge/Read-Publications-9b51e0?style=for-the-badge)](/rotsl/publications.md)

[![Community](https://img.shields.io/badge/Open-Community-2f80ed?style=for-the-badge)](/rotsl/community.md)

## Project landscape

```mermaid
flowchart TD
    rotsl((rotsl))
    rotsl --> Automation[Research Automation]
    rotsl --> Imaging[Computer Vision and Bio Imaging]
    rotsl --> Context[Context and Agent Systems]
    rotsl --> Tools[Developer Tools]
    rotsl --> Research[Applied ML Research Systems]
    Automation --> Automator
    Automation --> EDGAR
    Imaging --> grayleafspotr
    Imaging --> metricsPetri[metrics-petri]
    Imaging --> Models
    Context --> ContextFusion
    Context --> CFAdv
    Context --> ContextFission
    Context --> Hypercontext
    Tools --> Wisp
    Tools --> Weave
    Tools --> envguard
    Research --> CIA
    Research --> SMGP
    Research --> NexusRT
    Research --> EdgeCompiler
```

## Overview

I organize the portfolio around four recurring themes:

* Research Automation
* Computer Vision
* Embedded Systems
* Applied Machine Learning

The central idea is:

> Systems across UI, structure, and context.

Use the navigation to move from high-level project groups into individual systems, packages, models, publications, and community work.